prokka
https://github.com/tseemann/prokka
Perl
:zap: :aquarius: Rapid prokaryotic genome annotation
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- Issues
- Link `--proteins` section of manual to `fasta-db-format` section
- How to create a local (custom) database with a multifasta DNA sequence file in Prokka?
- Unnamed/uncharacterized genes are not annotated as expected
- prokka install issue with M1 mac processor using homebrew - miniforge
- Running prokka-genbank_to_fasta_db on new genbank format
- usegenus but no genus
- prokka signalp
- strange characters in intermediate files lead to failure in generating gbf output
- Manual installation of database
- Typo in The Core (BLAST+) Databases section
- Docs
- Perl not yet supported