prokka
https://github.com/tseemann/prokka
Perl
:zap: :aquarius: Rapid prokaryotic genome annotation
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- Issues
- Could not determine version of signalp ISSUE
- --noanno and --rawproduct options
- Mitocondrial annotation irregularities
- Prokka stops without generating files and without offering an apparent error
- Sequin Segmentation fault
- Prokka is not generating all the files while invoking prokka using shell script but working fine while running directly from commandline, why?
- Specify --coverage for proteins in my own FASTA db used with --proteins
- What database are included in lastest version, is prokka suitble for virus?
- ERROR conda.core.link:_execute(502): An error occurred while uninstalling package 'defaults::pip-10.0.1-py27_0'.
- Prokka halts at annotation of CDS
- Docs
- Perl not yet supported