prokka
https://github.com/tseemann/prokka
Perl
:zap: :aquarius: Rapid prokaryotic genome annotation
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Help out
- Issues
- could one "opt out" of Genbank submission
- Question on output inlA genes
- Database of small proteins
- Blast+ 2.10.0 cannot find the genus-specific protein db / possibility to have custom path to blast db?
- tbl2asn (25.8) error based on prokka command line flags
- format of GFF files
- Prokka truncates names of misc_RNAs in gbk
- Closing .fsa and .fna files
- add gene_biotype in annotation?
- EC_number is an invalid GFF3 attribute key
- Docs
- Perl not yet supported