quast
https://github.com/ablab/quast
AMPL
Genome assembly evaluation tool
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- Issues
- BUSCO problem: 100% Missing BUSCOs
- Understanding duplication level
- metaquast does not scale for large number of references
- Two feature requests
- FAQ3 doesn't explain interspecies translocation
- Gene prediction failed during run
- QUAST storing sam, bam, sorted.bam
- QUAST ignoring bam files
- Error while creating circos plot
- AttributeError encountered while sorting alignments
- Docs
- AMPL not yet supported